BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002D11SP1|AL424965
(927 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1785 1666 0.0
3x_Contig64 207 4e-53
>3x_Contig1785
Length = 37935
Score = 1666 bits (838), Expect = 0.0
Identities = 912/933 (97%), Gaps = 6/933 (0%)
Strand = Plus / Plus
Query: 1 atcacaaatagaggctatggaaaatgattcacaagadattactccattagccgggatcag 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 6407 atcacaaatagaggctatggaaaatgattcacaagaaattactccattagccgggatcag 6466
Query: 61 gcagaaaaacttgaatgccatcaaaaaggttgatgataaaactggtgaaactgtaagaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6467 gcagaaaaacttgaatgccatcaaaaaggttgatgataaaactggtgaaactgtaagaga 6526
Query: 121 ggcattcgaacatttcttgtcaaatttcaccgccctcaatgatgaaacaggtgagatgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6527 ggcattcgaacatttcttgtcaaatttcaccgccctcaatgatgaaacaggtgagatgga 6586
Query: 181 gaaggtttatagagtccaaattgaatatatgagatggtacgaattgaataccatatacgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6587 gaaggtttatagagtccaaattgaatatatgagatggtacgaattgaataccatatacgt 6646
Query: 241 tgactatwaacatttggccgaggtggaagacggagctttagcggttgctattttacaaca 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6647 tgactataaacatttggccgaggtggaagacggagctttagcggttgctattttacaaca 6706
Query: 301 gtattacagatttttgccattccttttatctgggctaagaaatgtggtgaagaagtacgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6707 gtattacagatttttgccattccttttatctgggctaagaaatgtggtgaagaagtacgc 6766
Query: 361 tcctggattattattaacatctgactctgtacttccttctcaatctcaaga-gaa-ttct 418
||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 6767 tcctggattattattaacatctgactctgtacttccttctcaatctcaagaagaacttct 6826
Query: 419 cagga-ccgctcttcgcaaagaatag--attcatctttgccaacttcgcaggctgccacc 475
||||| ||||||||||||||||| | ||| |||||||||||||||| |||||||||||
Sbjct: 6827 caggaaccgctcttcgcaaagaaaaagaattaatctttgccaacttcgaaggctgccacc 6886
Query: 476 gcag-aggcactgccccatctaccattgccactaatccagatcaggttgaacgtgttttg 534
| || | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6887 gaaggatgcactgccccatctaccattgccactaatccagatcaggttgaacgtgttttg 6946
Query: 535 caaatcagtttcctgaatctcccaactgtccatagaatcagagatattagggctaataag 594
||||||||||||| ||||||||||||||||||| ||||| | |||||||||||||||||
Sbjct: 6947 aaaatcagtttcctaaatctcccaactgtccatataatcatatatattagggctaataag 7006
Query: 595 attkgttctttaatggctatttcaggcacagtcacgagaacttcggaaattagaccagaa 654
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7007 attggttctttaatggctatttcaggcacagtcacgagaacttcggaaattagaccagaa 7066
Query: 655 ttatacaaagccagttttacatgcgaattgtgtcgagctgttattgacaatgtggaacaa 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7067 ttatacaaagccagttttacatgcgaattgtgtcgagctgttattgacaatgtggaacaa 7126
Query: 715 gttttcaagtacactgaaccaacctcttgtccaaatccaacatgtgagaaccaatctttc 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7127 gttttcaagtacactgaaccaacctcttgtccaaatccaacatgtgagaaccaatctttc 7186
Query: 775 tggtcattaaacgtgaacaggtccaaattcttggattggcaaaaggtaagaattcaagaa 834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7187 tggtcattaaacgtgaacaggtccaaattcttggattggcaaaaggtaagaattcaagaa 7246
Query: 835 aattccaatgaaattccatccggttctatgccaagaaccttagatattattcttcgtggt 894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7247 aattccaatgaaattccatccggttctatgccaagaaccttagatattattcttcgtggt 7306
Query: 895 gactgtktcgaaagagctaaaccaggtgataga 927
|||||| ||||||||||||||||||||||||||
Sbjct: 7307 gactgtgtcgaaagagctaaaccaggtgataga 7339
>3x_Contig64
Length = 1010
Score = 207 bits (104), Expect = 4e-53
Identities = 289/352 (82%)
Strand = Plus / Plus
Query: 6 aaatagaggctatggaaaatgattcacaagadattactccattagccgggatcaggcaga 65
||||||||| |||||||||||||| | |||| |||| | ||||| ||||| ||| |||
Sbjct: 644 aaatagaggatatggaaaatgattaaaaagaaattaataaattagaagggataaggaaga 703
Query: 66 aaaacttgaatgccatcaaaaaggttgatgataaaactggtgaaactgtaagagaggcat 125
|||| ||| ||| || ||||||||||||| ||||| ||||| || |||||| ||| ||
Sbjct: 704 aaaaattggatgaaataaaaaaggttgatgttaaaaatggtggaaatgtaaggaaggaat 763
Query: 126 tcgaacatttcttgtcaaatttcaccgccctcaatgatgaaacaggtgagatggagaagg 185
| ||| |||| |||| |||||| | | | ||||||| || ||||| |||||||||||
Sbjct: 764 tagaaaatttattgtaaaatttaaaagaaataaatgatgtaaaaggtgtgatggagaagg 823
Query: 186 tttatagagtccaaattgaatatatgagatggtacgaattgaataccatatacgttgact 245
|||||||||| ||||||||||||||| ||||| |||||||||| ||||| ||||| |
Sbjct: 824 tttatagagtaaaaattgaatatatgaaatggtgagaattgaataaaatataagttgaat 883
Query: 246 atwaacatttggccgaggtggaagacggagctttagcggttgctattttacaacagtatt 305
|| || |||||| ||||||||||| |||| ||||| ||||| ||||||| || ||||||
Sbjct: 884 ataaaaatttggaagaggtggaagaaggagatttagaggttgatattttaaaaaagtatt 943
Query: 306 acagatttttgccattccttttatctgggctaagaaatgtggtgaagaagta 357
| ||||||||| ||| |||||| |||| ||||||||||||||||||||||
Sbjct: 944 aaagatttttgaaattaattttatatgggataagaaatgtggtgaagaagta 995
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6780
Number of Sequences: 1807
Number of extensions: 6780
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 2
length of query: 927
length of database: 10,358,551
effective HSP length: 16
effective length of query: 911
effective length of database: 10,329,639
effective search space: 9410301129
effective search space used: 9410301129
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)